Interface of input file ?

interface graph
legend  pdf

footprint
legend

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameX-RAY STRUCTURE OF THE H2A-N38C NUCLEOSOME CORE PARTICLE
referenceRichmond et al. 'J. 430 45 2018
experimentX-ray (resolution=2.32, R-factor=?)
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4;
multimeric complexes5omx_ABCDEFGH 5onw_ABCDEFGH
redundant complexes5onw
links to other resourcesNAKB PDBSum PDIdb DNAproDB 
  
  --RT                             +---------7jzv_N    
               +-------------------2 
  --RC         !                   !     +---6qld_f    
             +-3                   +-----1 
  LC--       ! !                         +---8bvw_e    
           --4 ! 
  --RT       ! +-----------------------------8com_C    
             ! 
  --RT       +-----------------------------7on1_e

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updated Wed Dec 18 02:08:17 2024