Interface of input file ?

interface graph
legend  pdf

footprint
legend

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameCRYO-EM STRUCTURE OF HUMAN KINETOCHORE PROTEIN CENP-N WITH THE CENTROMERIC NUCLEOSOME CONTAINING CENP-A
experimentNMR
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4;
multimeric complexes6c0w_ABCDEFGHK 6e0c_ABCDEFGH 6e0p_ABCDEFGH 6muo_ABCDEFGHM 6mup_ABCDEFGHMN 6o1d_ABCDEFGH 6se0_ABCDEFGH 6se6_ABCDEFGH 6see_ABCDEFGH 6sef_ABCDEFGH 6seg_ABCDEFGH 6tem_ABCDEFGH 7pii_ABCDEFGH 7r5r_ABCDEFGH 7u46_ABCDEFGHK 7u47_ABCDEFGHK 7u47_LMNOPQRSV 7u4d_ABCDEFGHK 7u4d_LMNOPQRS 7ywx_ABCDEFGLNVW
redundant complexes6se0_A 6e0c 6e0p 6muo 6mup 6o1d 6se6 6see 6sef 6seg 6tem 7pii 7r5r 7u46 7u47 7u4d 7ywx
links to other resourcesNAKB PDBSum PDIdb DNAproDB
  
  ----LT--------                                                      +7ywx_E    
                                                                 +----1 
  ----LA----RG--                        +------------------------2    +7unc_a    
                                        !                        ! 
  ----------RA--                      +-3                        +----7xsx_a    
                                      ! ! 
  ----LT--------                    +-4 +-----------------------------4z5t_A    
                                    ! ! 
  ----EA------RG                  +-5 +-----------------------------7n8n_A    
                                  ! ! 
  RA--ET--RT----                +-6 +-----------------------------4ne1_p    
                                ! ! 
  ----------RT--              +-7 +-----------------------------7m1x_C    
                              ! ! 
  --RAAANA------            +-8 +-----------------------------1jfi_B    
                            ! ! 
  ----------RT--          +-9 +-----------------------------6m4d_C    
                          ! ! 
  ----------RT--       +-10 +-----------------------------7lyb_G    
                       !  !  
  ----------RA--     -11  +-----------------------------6t7a_C    
                       !  
  ----------RC--       +-----------------------------6qld_f    
                     

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updated Sat Jan 10 09:50:19 2026