6e0p_A : 3D-footprint complex

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	CRYO-EM STRUCTURE OF THE CENTROMERIC NUCLEOSOME (NATIVE ALPHA SATELLITE DNA) IN COMPLEX WITH A SINGLE CHAIN ANTIBODY FRAGMENT (HISTONE H3-LIKE CENTROMERIC PROTEIN A)
source	HOMO SAPIENS
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	6e0c_ABCDEFGH 6e0p_ABCDEFGH 6o1d_ABCDEFGH
redundant complexes	6e0c 6o1d
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6e0p_A interface=2,24, rRrqgwlkeirklqksthllirkLpfsrlareicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhagrvtlfpkdvqlarrirgleeglg

  
  --RT----             +-----------------------------8grq_A    
                     +-6 
  LCRT----         +-7 +-----------------------------8hr1_E    
                   ! ! 
  ----RA--       +-8 +-----------------------------6g0l_D    
                 ! ! 
  --RG----       ! +-----------------------------8ox0_C    
                 ! 
  --RG----       !                               +8txv_G    
               --9                             +-1 
  --RA----       !         +-------------------3 +1zla_C    
                 !         !                   ! 
  --RA--RA       !      +--4                   +6a5l_g    
                 !      !  ! 
  --RG----       +------5  +-------------------8jla_C    
                        ! 
  --RT----              !                      +8u14_G    
                        +----------------------2 
  --RG----                                     +5x0y_G

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updated Wed Dec 18 03:33:01 2024