6e0p_A : 3D-footprint complex

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	CRYO-EM STRUCTURE OF THE CENTROMERIC NUCLEOSOME (NATIVE ALPHA SATELLITE DNA) IN COMPLEX WITH A SINGLE CHAIN ANTIBODY FRAGMENT (HISTONE H3-LIKE CENTROMERIC PROTEIN A)
source	HOMO SAPIENS
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	6e0c_ABCDEFGH 6e0p_ABCDEFGH 6o1d_ABCDEFGH
redundant complexes	6e0c 6o1d
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6e0p_A interface=2,24, rRrqgwlkeirklqksthllirkLpfsrlareicvkftrgvdfnwqaqallalqeaaeaflvhlfedaylltlhagrvtlfpkdvqlarrirgleeglg

  
  --IT--RA                                  +7k78_E    
                             +--------------2 
  ------RT              +----4              +7lya_E    
                        !    ! 
  ------RT            +-5    +---------------7wlr_E    
                      ! ! 
  ------RT            ! +--------------------7zs9_e    
                 +----6 
  ------RT       !    !                     +1u35_G    
                 !    !      +--------------1 
  ------RT     --7    +------3              +7lyb_G    
                 !           ! 
  ------RA       !           +--------------6t7a_C    
                 ! 
  RAETRT--       +--------------------------4ne1_p

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updated Fri Sep 13 21:33:49 2024