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legend  pdf

structure nameCRYSTAL STRUCTURE OF THE TRANSCRIPTIONAL REGULATOR CADR FROM P. PUTIDA IN COMPLEX WITH ZINC(II) AND DNA
(CADR)
referenceLiu et al. Proc.Natl.Acad.Sci.USA 116 20398 2019
sourcePSEUDOMONAS PUTIDA
experimentX-ray (resolution=2.90, R-factor=0.214)
structural superfamilyPutative DNA-binding domain;
sequence familyMerR, DNA binding; MerR family regulatory protein;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureERYRY

Estimated binding specificities ?

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# IC=7.431 IC/col=0.743 n_of_columns=10 specificity:   
A |  79   0   0  96   5  79  24  24   5   5
C |   5  96   0   0   7   5  24  24   7  13
G |   5   0   0   0   5   7  24  24  79   5
T |   7   0  96   0  79   5  24  24   5  73
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updated Tue Dec 17 04:35:46 2024