6jyw_B : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE TRANSCRIPTION REGULATOR CADR N81M MUTANT FROM P. PUTIDA IN COMPLEX WITH CADMIUM(II) AND DNA
reference	Liu et al. 'To ? ? ?
experiment	X-ray (resolution=2.95, R-factor=0.205)
structural superfamily	Putative DNA-binding domain;
sequence family	MerR, DNA binding; MerR family regulatory protein;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6jyw_B interface=15,18,19,36, mkigelakatdcavEtiRYyereqllpeparsdgnYrlytqahverltfirncrtldmtldeirsllrlrdspddscgsvmalidehiehvqaridglvalqeqlvelrrrcnecailqqletngavsvpet
interface signature	ERYY

Estimated binding specificities ?

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# IC=3.999 IC/col=0.444 n_of_columns=9

specificity:

A |   7   0  24  24  24  81  14  24   7
C |   7  96  24  24  24   7   0  24   1
G |  75   0  24  24  24   8  59  24  81
T |   7   0  24  24  24   0  23  24   7

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updated Tue Dec 17 04:42:51 2024