6jyw_B : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE TRANSCRIPTION REGULATOR CADR N81M MUTANT FROM P. PUTIDA IN COMPLEX WITH CADMIUM(II) AND DNA
reference	Liu et al. 'To ? ? ?
experiment	X-ray (resolution=2.95, R-factor=0.205)
structural superfamily	Putative DNA-binding domain;
sequence family	MerR, DNA binding; MerR family regulatory protein;
multimeric complexes	6jgw_AB 6jgx_AB 6jni_CD 6jni_EF 6jyw_AB
reference complex	6jgx_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6jyw_B interface=15,18,19,36, mkigelakatdcavEtiRYyereqllpeparsdgnYrlytqahverltfirncrtldmtldeirsllrlrdspddscgsvmalidehiehvqaridglvalqeqlvelrrrcnecailqqletngavsvpet
interface signature	ERYY

Estimated binding specificities ?

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# IC=4.026 IC/col=0.447 n_of_columns=9

specificity:

A |   0   0  24  24  24  73  24  24   0
C |   8  96  24  24  24   9  14  24   7
G |  81   0  24  24  24   7  51  24  89
T |   7   0  24  24  24   7   7  24   0

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updated Thu Sep 12 23:58:13 2024