interface graph thumbnail
legend  pdf

structure nameSTRUCTURAL BASIS FOR COOPERATIVE BINDING OF EBNA1 TO THE EPSTEIN-BARR VIRUS DYAD SYMMETRY MINIMAL ORIGIN OF REPLICATION
(Epstein-Barr nuclear antigen 1)
referenceLieberman et al. J.Virol. 93 ? 2019
sourceEpstein-Barr virus (strain B95-8) / Epstein-Barr virus (strain B95-8)
experimentX-ray (resolution=3.01, R-factor=?)
structural superfamilyViral DNA-binding domain;
sequence familyEpstein Barr virus nuclear antigen1, DNAbi;
multimeric complexes1b3t_AB 6pw2_ABCD 6pw2_IKL 7u1t_ABCD 8dlf_ABCD
reference complex7u1t_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureWFRKKTYNR

Estimated binding specificities ?

contactlogo
# IC=7.444 IC/col=0.931 n_of_columns=8 specificity:   
A |   6  13   0   0  61   6   0   0
C |   9  13   0   0   6  84  96  96
G |   6  57   0   0  13   0   0   0
T |  75  13  96  96  16   6   0   0
scan!

home
updated Mon Dec 18 17:32:03 2023