interface graph thumbnail
legend  pdf

structure nameSTRUCTURAL BASIS FOR COOPERATIVE BINDING OF EBNA1 TO THE EPSTEIN-BARR VIRUS DYAD SYMMETRY MINIMAL ORIGIN OF REPLICATION
(Epstein-Barr nuclear antigen 1)
referenceLieberman et al. J.Virol. 93 ? 2019
sourceEpstein-Barr virus (strain B95-8) / Epstein-Barr virus (strain B95-8)
experimentX-ray (resolution=3.01, R-factor=?)
structural superfamilyViral DNA-binding domain;
sequence familyEpstein Barr virus nuclear antigen1, DNAbi;
multimeric complexes1b3t_AB 6pw2_ABCD 6pw2_IKL 7u1t_ABCD 8dlf_ABCD
reference complex7u1t_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureWFRKKTYNR

Estimated binding specificities ?

contactlogo
# IC=7.244 IC/col=0.905 n_of_columns=8 specificity:   
A |   0   0   6  12  89  96  15  84
C |   0   0   6  14   1   0  57   6
G |  96  96  76   6   6   0  12   0
T |   0   0   8  64   0   0  12   6
scan!

home
updated Fri Sep 13 01:33:47 2024