7ea5_E : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	YEAST SET2 BOUND TO A NUCLEOSOME CONTAINING ONCOHISTONE MUTATIONS
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	7ea5_ABCDEFGH
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7ea5_E interface=2,3,46, pHRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger

  
  RG--RT----         +-----------------------------8grq_A    
                     ! 
  RG--------         !                            +8jh2_e    
                     !         +------------------3 
  RGLCRT----         !      +--5                  +8hr1_E    
                   +-9      !  ! 
  ------RA--       ! !   +--7  +-------------------6g0l_D    
                   ! !   !  ! 
  ----RG----       ! !   !  +----------------------8jla_C    
                   ! !   ! 
  ----RA----       ! +---8                        +1zla_C    
                   !     !          +-------------2 
  ----RA--RA     -10     !          !             +6a5l_g    
                   !     !  +-------4 
  ----RT----       !     !  !       !              +8u14_G    
                   !     +--6       +--------------1 
  ----RG----       !        !                      +8ox0_C    
                   !        ! 
  ----RG----       !        +----------------------5x0y_G    
                   !  
  ----RG----       +-----------------------------8txv_G

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updated Wed Dec 18 08:43:58 2024