Interface of input file ?

interface graph
legend  pdf

footprint
legend

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameYEAST SET2 BOUND TO A NUCLEOSOME CONTAINING ONCOHISTONE MUTATIONS
experimentNMR
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4;
multimeric complexes7ea5_ABCDEFGH
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
  
  ----RC                                 +---6qld_f    
               +-------------------------4 
  ----RA       !                         +---7xsx_a    
               ! 
  LC----       !                             +5mlu_A    
             --7              +--------------1 
  LT----       !              !              +4z5t_A    
               !       +------5 
  ----RT       !       !      !                +8g57_E    
               !       !      !              +-2 
  ----RA       +-------6      +--------------3 +7ea8_A    
                       !                     ! 
  LT--RC               !                     +5xm1_A    
                       ! 
  --KT--   L           +---------------------7cvo_A    
             

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updated Sat Sep 14 02:22:14 2024