7lbx_B : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF TFAM (MITOCHONDRIAL TRANSCRIPTION FACTOR A) IN COMPLEX WITH LSP (Transcription factor A, mitochondrial)
reference	Garcia-Diaz et al. 'Nucleic 50 322 2022
source	Homo sapiens
experiment	X-ray (resolution=2.70, R-factor=0.210)
structural superfamily	HMG-box;
sequence family	HMG high mobility group box;
multimeric complexes	6erp_ACF 6erp_BGJ 6erq_ACF 6erq_BGJ 7lbw_AB
reference complex	3tmm_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7lbx_B interface=9,12,14,15,18,22,34,35,38,100,104,114,119,120,123,127,135,136,139,143, svlascpkKpvSsYLrfSkeqLpifkaqnpdakTTelIrriaqrwrelpdskkkiyqdayraewqvykeeisrfkeqltpsqimslekeimdkhlkrkaMtkkKeltllgkpkRprsaYNvyVaerFqeakgdsPQekLktvKenwknlsdsekelyiqhakedetryhnemksweeqmievgrkdllr
interface signature	KSYLSLTTIMKRYNVFPQLK

Estimated binding specificities ?

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# IC=10.250 IC/col=0.641 n_of_columns=16

specificity:

A |   0   0   0   8  24  24  24  24  24  16  24   0   0   0   0   8
C |   0   0   0   8  24  24  24  24  24  16  24  96   0   0   0  16
G |   0   0  96  72  24  24  24  24  24  56  24   0   0  96   8   8
T |  96  96   0   8  24  24  24  24  24   8  24   0  96   0  88  64

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updated Fri Jan 9 13:26:21 2026