3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameSTRUCTURE OF THE MARSEILLEVIRUS NUCLEOSOME
(HISTONE DOUBLET BETA-ALPHA BETA)
sourceMARSEILLEVIRUS MARSEILLEVIRUS
experimentNMR
structural superfamilyHistone-fold;
multimeric complexes7lv8_ABCDEFGH
links to other resourcesNAKB PDBSum PDIdb DNAproDB 
  
  --RA--         +-----------------------------6g0l_D    
               +-8 
  RG----       ! +-----------------------------5x0y_G    
               ! 
  RA----       !                             +1zla_C    
               !              +--------------1 
  RG----     --9         +----4              +8ox0_C    
               !         !    ! 
  RA--RA       ! +-------5    +--------------6a5l_g    
               ! !       ! 
  RG----       ! !       +-------------------8jla_C    
               +-7 
  RG----         !               +-----------8txv_G    
                 !      +--------2 
  RT----         !      !        +-----------8grq_A    
                 +------6 
  RT----                !        +-----------8u14_G    
                        +--------3 
  RT----                         +-----------8hr1_E

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updated Wed Dec 18 09:37:34 2024