3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameSTRUCTURE OF THE MARSEILLEVIRUS NUCLEOSOME
(HISTONE DOUBLET BETA-ALPHA BETA)
sourceMARSEILLEVIRUS MARSEILLEVIRUS
experimentNMR
structural superfamilyHistone-fold;
multimeric complexes7lv8_ABCDEFGH
links to other resourcesNAKB PDBSum PDIdb DNAproDB 
  
  ------RT                                           +1u35_G    
                                      +--------------1 
  ------RT             +--------------2              +7lyb_G    
                       !              ! 
  ------RA           +-3              +--------------6t7a_C    
                     ! ! 
  ------RT         +-4 +-----------------------------7lya_E    
                   ! ! 
  ------RT       +-5 +-----------------------------7wlr_E    
                 ! ! 
  ------RT     --6 +-----------------------------7zs9_e    
                 ! 
  RAETRT--       +-----------------------------4ne1_p

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updated Sat Sep 14 03:05:33 2024