7n8n_A : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	MELBOURNEVIRUS NUCLEOSOME LIKE PARTICLE (HISTONE H4-H3 DOUBLET)
source	MELBOURNEVIRUS
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	7n8n_ABCD
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7n8n_A interface=59,129,180, dhvsvgetqipkastqhllrkagslsaagdtevpirgfvhmklhklvqksllamqlakRktimksdvkkaaelmhlpvfaiptkdsgakgsvflscrqkgagsagtgsetnsqevrsqmkstcliipkErfrtmakeiskkeghdvhiaeaaldmlqvivesctvrllekalvitysgkRtrvtskdietafmlehg

  
  --------LCRT           +-----------------------------8hr1_E    
                       +-7 
  ------RG--RT       +-8 +-----------------------------8grq_A    
                     ! ! 
  RA--RA------       ! +-----------------------------6a5l_g    
                     ! 
  RA----------       !                            +1zla_C    
                   --9             +--------------2 
  RG----------       !   +---------4              +5x0y_G    
                     !   !         ! 
  RG----------       !   !         +---------------8jla_C    
                     +---6 
  RG----------           !                         +8txv_G    
                         !       +-----------------1 
  RG----------           !       !                 +8ox0_C    
                         +-------5 
  RT----------                   !       +---------8u14_G    
                                 +-------3 
  --RA--------                           +---------6g0l_D

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updated Wed Dec 18 09:51:52 2024