7n8n_A : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	MELBOURNEVIRUS NUCLEOSOME LIKE PARTICLE (HISTONE H4-H3 DOUBLET)
source	MELBOURNEVIRUS
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	7n8n_ABCD
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7n8n_A interface=59,129,180, dhvsvgetqipkastqhllrkagslsaagdtevpirgfvhmklhklvqksllamqlakRktimksdvkkaaelmhlpvfaiptkdsgakgsvflscrqkgagsagtgsetnsqevrsqmkstcliipkErfrtmakeiskkeghdvhiaeaaldmlqvivesctvrllekalvitysgkRtrvtskdietafmlehg

  
  ----YA----------RT            +--------------------------7wlr_E    
                                ! 
  ----RGRA----------          +-6 +-------------------------7nky_e    
                              ! ! ! 
  ----------IT----RA          ! +-5                  +------7k78_E    
                              !   !     +------------2 
  --------RA--ETRT--          !   !     !            +------4ne1_p    
                              !   +-----4 
  RT----------------       +--7         !                   +1u35_G    
                           !  !         !    +--------------1 
  RT----------------       !  !         +----3              +7lyb_G    
                           !  !              ! 
  RA----------------     --8  !              +--------------6t7a_C    
                           !  ! 
  ----RG----------RT       !  +--------------------------7zs9_e    
                           ! 
  --RG------------RT       +-----------------------------7lya_E

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updated Sat Sep 14 03:18:50 2024