7uv9_E : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	KDM2A-NUCLEOSOME STRUCTURE STABILIZED BY H3K36C-UNC8015 COVALENT CONJUGATE
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7uv9_E interface=1,44, RyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirger

  
  --RT----             +-----------------------------8grq_A    
                     +-6 
  LCRT----         +-7 +-----------------------------8hr1_E    
                   ! ! 
  ----RA--       +-8 +-----------------------------6g0l_D    
                 ! ! 
  --RG----       ! +-----------------------------5x0y_G    
                 ! 
  --RT----       !                             +8u14_G    
               --9              +--------------1 
  --RG----       !         +----3              +8ox0_C    
                 !         !    ! 
  --RA--RA       !   +-----4    +--------------6a5l_g    
                 !   !     ! 
  --RG----       +---5     +-------------------8jla_C    
                     ! 
  --RG----           !                         +8txv_G    
                     +-------------------------2 
  --RA----                                     +1zla_C

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updated Wed Dec 18 13:24:29 2024