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structure nameCO-CRYSTAL STRUCTURE OF C-TERMINAL DNA BINDING DOMAIN OF SACCHAROPOLYSPORA ERYTHRAEA GLNR IN COMPLEX WITH ITS COGNATE PROMOTER DNA
(DNA-binding response OmpR family regulator)
referenceZhang et al. 'To ? ? ?
sourceSaccharopolyspora erythraea NRRL 2338
experimentX-ray (resolution=2.33, R-factor=0.265)
structural superfamilyC-terminal effector domain of the bipartite response regulators;
sequence familyTranscriptional regulatory protein, C ter;
multimeric complexes8hig_AB
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRTDVRR

Estimated binding specificities ?

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# IC=6.338 IC/col=0.905 n_of_columns=7 specificity:   
A |   0   7   0   7  73   0   7
C |   0   7   0   7   7  96  73
G |   0  75   0   7   7   0   7
T |  96   7  96  75   9   0   9
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updated Wed Dec 18 18:16:12 2024