| structure name | CRYSTAL STRUCTURE OF C-TERMINAL DNA-BINDING DOMAIN OF ESCHERICHIA COLI OMPR IN COMPLEX WITH F1-DNA (Transcriptional regulatory protein OmpR) |
| reference | Sadotra et al. J.Struct.Biol. 213 107638 2020 |
| source | Escherichia coli |
| experiment | X-ray (resolution=2.93, R-factor=0.178) |
| structural superfamily | C-terminal effector domain of the bipartite response regulators; |
| sequence family | Transcriptional regulatory protein, C ter; |
| multimeric complexes | 6lxn_AB |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | RDVSRW |
Estimated binding specificities ?
| contact |  |
A | 19 0 0 19 78 0 96 C | 8 0 0 17 8 96 0 G | 52 96 0 8 10 0 0 T | 17 0 96 52 0 0 0scan! |
Dendrogram of similar interfaces ?
matrix format------RG----DTVT----STRG----RC-- L +---------------------4nhj_A +------5 ----------------------YGRG------ ! ! +4wcg_A ! +--------------------1 YA----KTPTPG----YTRG------------ L ! +4mtd_D +-7 --RTTC--DTSC----SGKG--------RT-- L ! ! +-----------5x5l_H ! ! +-------------3 ------------------RC------KT---- ! ! ! +-----------2acj_B ! +--6 ------------------RG------------ +-8 ! +--1qbj_C ! ! ! +--------------2 ----------NT--TCTA------------RT L ! ! +-------4 +--5zux_A ! ! ! ----------------------YG-------- +-9 ! +-----------------1sfu_A ! ! ! ------RTTT--DAVT----RGRG----RA-- L ! ! +-----------------------------1gxp_A -10 ! ----------------------YG-------- ! +-----------------------------3eyi_B ! RG--TGRGTG----RTET----------HA-- L +-----------------------------1h9t_B |
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updated Fri Sep 13 22:35:05 2024