Interface of input file ?

legend  pdf


legend

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

home
updated Mon Dec 16 16:07:29 2024

structure name	CRYO-EM STRUCTURES OF RNF168/UBCH5C-UB IN COMPLEX WITH H2AK13UB NUCLEOSOMES DETERMINED BY ACTIVITY-BASED CHEMICAL TRAPPING STRATEGY (ADJACENT H2AK13/15 DUAL-MONOUBIQUITINATION)
experiment	NMR
structural superfamily	Histone-fold;PH domain-like;lambda repressor-like DNA-binding domains;p53-like transcription factors;Nucleic acid-binding proteins;P-loop containing nucleoside triphosphate hydrolases;
reference complex	5gtc_H 6a5l_d 6c0w_H 6ftx_B 6r8y_H 6see_H 6t7a_H 6upk_H 6x0n_f 6x59_H 6y5d_H 7d1z_H 7e8d_H 7k5x_H 7k60_H 7k63_H 7nkx_f 7pet_H 7scy_H 7u0g_M 7vdt_B 7xcr_F 7xzx_N 7xzz_N 8h0v_h 8hr1_E 8xgc_4
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8x7k_A interface=2,45, hRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlsaihakrvtimpkdiqlarrirger > 8x7k_B interface=25, vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfg > 8x7k_C interface= actrssraglqfpvgrvhrllrkgNyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk > 8x7k_D interface=3, rsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkyts > 8x7k_E interface=2,3,46, pHRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaseaylvglfedtnlsaihakrvtimpkdiqlarrirger > 8x7k_F interface= kVLrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenVirdavtytehakrktvtamdvvyalkrqgrtlygfg > 8x7k_G interface=2, aRakaktrssraglqfpvgrvhrllrkgnyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllp > 8x7k_H interface= rSrkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa