7lyb_G : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	CRYO-EM STRUCTURE OF THE HUMAN NUCLEOSOME CORE PARTICLE IN COMPLEX WITH BRCA1-BARD1-UBCH5C
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	7lyb_ABCDEFGH 8u14_ABCDEFGH 8upf_ABCDEFGH
redundant complexes	8upf_C 8u14
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7lyb_G interface=32, sakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkkt

  
  --RT----                               +8u14_G    
                          +--------------1 
  --RG----                !              +5x0y_G    
                          !  
  --RT----                !                 +8smw_G    
                          !               +-2 
  --RA----       +-------13     +---------5 +1zla_C    
                 !        !     !         ! 
  --RA--RA       !        !  +-10         +6a5l_g    
                 !        !  !  !  
  --RG----       !        !  !  !         +8txv_G    
                 !        +-12  +---------3 
  --RG----       !           !            +8ox0_C    
                 !           !  
  --RG----     -15           +-----------8jla_C    
                 !  
  --RG--RG       !               +-------8kcb_A    
                 !     +---------9 
  LARG----       !     !         !      +7unc_a    
                 !     !         +------6 
  LCRT----       !     !                +8hr1_E    
                 !     !  
  --RC----       +----14             +---6qld_f    
                       !           +-7 
  ----RA--             !     +-----8 +---6g0l_D    
                       !     !     ! 
  LC------             +----11     +-----8bvw_e    
                             !  
  --RA----                   !           +7xsx_a    
                             +-----------4 
  --RT----                               +8grq_A

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updated Sun Aug 3 17:02:41 2025