7lyb_G : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	CRYO-EM STRUCTURE OF THE HUMAN NUCLEOSOME CORE PARTICLE IN COMPLEX WITH BRCA1-BARD1-UBCH5C
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	7lyb_ABCDEFGH 8u14_ABCDEFGH 8upf_ABCDEFGH
redundant complexes	8upf_C 8u14
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7lyb_G interface=32, sakaktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkkt

  
  --RT--               +------------------------8u14_G    
                       ! 
  --RC--             +-4                    +---6qld_f    
                     ! !             +------2 
  --RA--             ! !             !      !   +7xsx_a    
                     ! +-------------3      +---1 
  LARG--         +---5               !          +7unc_a    
                 !   !               ! 
  LC----         !   !               +----------8bvw_e    
               +-6   ! 
  --RG--       ! !   +-------------------------8txv_G    
             --7 ! 
  --RGRG       ! +-----------------------------8kcb_A    
               ! 
  --RT--       +-----------------------------8smw_G

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updated Sat Sep 14 03:09:45 2024