| structure name | CRYSTAL STRUCTURE OF A BACTERIAL QUORUM-SENSING TRANSCRIPTION FACTOR COMPLEXED WITH PHEROMONE AND DNA (Transcriptional activator protein traR) |
| reference | Molyneaux et al. Nature 417 971 2002 |
| source | Agrobacterium tumefaciens |
| experiment | X-ray (resolution=1.66, R-factor=?) |
| structural superfamily | Pheromone-binding domain of LuxR-like quorum-sensing transcription factors;C-terminal effector domain of the bipartite response regulators; |
| sequence family | Autoinducer binding domain; Bacterial regulatory proteins, luxR fami; |
| multimeric complexes | 1h0m_AB 1h0m_CD 1l3l_AC 1l3l_BD |
| redundant complexes |  1h0m_C
|
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | MYNRVRE |
Estimated binding specificities ?
| readout + contact |  |
A | 8 0 0 96 56 64 C | 24 0 96 0 24 8 G | 16 96 0 0 8 16 T | 48 0 0 0 8 8scan! |
Dendrogram of similar interfaces ?
matrix format--YTNT--RGVT--RTET L +-------------------1l3l_A +----1 TC--KTTCKGTCHTST-- L +-2 +-------------------7ve5_B ! ! ----KGTCKGTCHT---- L --3 +------------------------4wuh_B ! ----SCTAKTVCHTKG-- L +--------------------------1je8_F |
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updated Sun Aug 3 05:44:32 2025