| structure name | HUMAN MBD4 GLYCOSYLASE DOMAIN BOUND TO DNA CONTAINING SUBSTRATE ANALOG 2'-DEOXY-PSEUDOURIDINE (Methyl-CpG-binding domain protein 4) |
| reference | Pozharski et al. J.Mol.Biol. 433 167097 2021 |
| source | Homo sapiens |
| experiment | X-ray (resolution=1.57, R-factor=0.190) |
| structural superfamily | DNA-glycosylase; |
| redundant complexes | 4dk9 7kz1 7kzg |
| reference complex | 4ofa_A |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Dendrogram of similar interfaces ?
matrix format--------NGRGTG----LG--LCRG------------------ +7kz0_A +--------1 LTVTQTLTNGRGTG----LC--LCRG------------YTNTKT ! +4ofa_A +-----4 ----------QG--QG--YC------------------------ L ! ! +----7ef9_A ! +---2 ----------QG--RG--YC------------------------ +------5 +----6u7t_A ! ! --------NGRGTG----LG--LCRG------------------ ! ! +------4e9f_A +--6 +-------3 ----------QTLAHGAT------KT------------------ ! ! +------3s6i_A +---7 ! ----------NCNANARC--YGRC-------------------- ! ! +---------------------2xhi_A +-8 ! --------------------------RTVAITNAMCRG------ L ! ! +------------------------1yrn_A +-9 ! --------HTRT----------------NCSTNARG-------- L ! ! +----------------------------1k61_B -10 ! --------RA------------------ITQCNAMC-------- L ! +----------------------------1b8i_A ! --------------------------RTVAIANAMCRG------ L +----------------------------1le8_A |
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updated Mon Dec 18 20:47:46 2023