| structure name | DNA POLYMERASE ETA IN COMPLEX WITH A CIS-SYN THYMIDINE DIMER (DNA polymerase eta) |
| reference | Silverstein et al. Nature 465 1039 2010 |
| source | Saccharomyces cerevisiae |
| experiment | X-ray (resolution=1.76, R-factor=0.165) |
| structural superfamily | DNA/RNA polymerases;Lesion bypass DNA polymerase Y-family, little finger domain; |
| sequence family | impB/mucB/samB family; |
| redundant complexes | 2r8j_B 2r8k_A 2wtf_A 2xgp_B 2xgq_A 3mfh_A 3oha_A 3ohb_A |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Dendrogram of similar interfaces ?
matrix format----------------------------------MANG----------YARC--ST-------- +-------3mfi_A +----------6 --YG----------------------------------EG------RA------QA-------- +----8 +-------3osn_A ! ! ------IT----------------------------ST--PATA------------RC------ ! +------------------7m7n_A ! ----AG--------PCIAKAQA--------KC----YC----------LCST--------RC-- ! +4f4y_B ! +-1 ----AC----AG--------------------ST--YG------RG--LC----------RCKT ! +-2 +4f4z_A ! ! ! ----AGAG------PC--------------------IC--------HALCST--------RGRG -10 +-3 +4f4w_A ! ! ! ----VASA----AAPT--MT----------------EG------RT--FT--------RT---- ! +-------------5 +5yuy_A ! ! ! FCYC----TTAT----------SCICDCEC--ST--------------------------RCRT ! ! ! +4tqr_A ! +-----7 +-4 ----EG--------FG----------------------ET------------------------ ! ! ! +3gqc_A +-9 ! ----MA--------PAFAIA----------------EC----------FTTG------------ ! +---------------7nv0_A ! ----MASA----AAPC--IC----------------EG--------------TG--------RG +---------------------2oh2_B |
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updated Fri Sep 13 17:25:17 2024