| structure name | CRYSTAL STRUCTURE OF THE DNA BINDING ETS DOMAIN OF THE HUMAN PROTEIN FEV IN COMPLEX WITH DNA (PROTEIN FEV) |
| reference | Burgess-Brown et al. J.Biol.Chem. 290 13692 2015 |
| source | HOMO SAPIENS |
| experiment | X-ray (resolution=2.00, R-factor=0.212) |
| structural superfamily | "Winged helix" DNA-binding domain; |
| sequence family | Etsdomain; |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | SDKRRY |
Estimated binding specificities ?
| readout + contact |  |
A | 0 0 0 96 24 38 C | 77 0 0 0 24 19 G | 0 96 96 0 24 19 T | 19 0 0 0 24 20scan! |
Related DNA sequences reported in the literature ?
| site | source | matches (E-value) |
|---|---|---|
| term: ETS CRYSTAL STRUCTURE OF THE DNA BINDING ETS DOMAIN OF THE HUMAN PROTEIN FEV IN COMPLEX WITH DNA mining | ||
| ACGGAAGT | PubMed | 3zp5_A(7.29e-03) |
| ACTTCCG | PubMed | 3zp5_A(3.91e-03) |
| CCGGAA | PubMed | 3zp5_A(1.33e-03) |
| CCGGAAGT | PubMed | 3zp5_A(7.29e-03) |
| CGGAA | PubMed | 3zp5_A(4.30e-04) |
| GCCGGAA | PubMed | 3zp5_A(3.91e-03) |
| GCGGAA | PubMed | 3zp5_A(1.33e-03) |
| GGCGGAAGT | PubMed | 3zp5_A(1.16e-02) |
Dendrogram of similar interfaces ?
matrix format------DCKT--RG----RGYA----KA---- L +5jvt_A +--------------------1 ------DCKT--RGST--RGYA---------- L +-------3 +4bnc_A ! ! ----------RGNT--RGSTAT--RA------ L +-5 +---------------------2o6g_G ! ! ------QCKT--RGAT--RGNT---------- L ! +-----------------------------8smh_F +-6 --KTHG-------------------------- ! ! +--------5hdn_C ! ! +------------2 ------NCTTNA------VTNT---------- L --7 +-------4 +--------1pp7_U ! ! TT----KATTQTTG----LTRT----KAFTYT L ! +---------------------2p7c_B ! ----------NAST--RGHT--STFT------ L +-----------------------------1vtn_C |
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updated Sat Jan 10 06:48:12 2026