| structure name | CRYSTAL STRUCTURE OF THE DNA BINDING ETS DOMAIN OF THE HUMAN PROTEIN FEV IN COMPLEX WITH DNA (PROTEIN FEV) |
| reference | Burgess-Brown et al. J.Biol.Chem. 290 13692 2015 |
| source | HOMO SAPIENS |
| experiment | X-ray (resolution=2.00, R-factor=0.212) |
| structural superfamily | "Winged helix" DNA-binding domain; |
| sequence family | Etsdomain; |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | SDKRRY |
Estimated binding specificities ?
| readout + contact |  |
A | 0 0 0 96 24 38 C | 76 0 0 0 24 20 G | 0 96 96 0 24 19 T | 20 0 0 0 24 19scan! |
Related DNA sequences reported in the literature ?
| site | source | matches (E-value) |
|---|---|---|
| term: ETS CRYSTAL STRUCTURE OF THE DNA BINDING ETS DOMAIN OF THE HUMAN PROTEIN FEV IN COMPLEX WITH DNA mining | ||
| ACGGAAGT | PubMed | 3zp5_A(7.29e-03) |
| ACTTCCG | PubMed | 3zp5_A(3.91e-03) |
| CCGGAA | PubMed | 3zp5_A(1.33e-03) |
| CCGGAAGT | PubMed | 3zp5_A(7.29e-03) |
| CGGAA | PubMed | 3zp5_A(4.30e-04) |
| GCCGGAA | PubMed | 3zp5_A(3.91e-03) |
| GCGGAA | PubMed | 3zp5_A(1.33e-03) |
| GGCGGAAGT | PubMed | 3zp5_A(1.16e-02) |
Dendrogram of similar interfaces ?
matrix format------QCKT--RGATRGNT------ L +-----------------------------8smh_F ! --KTHG-------------------- --3 +--------5hdn_C ! +------------1 ------NCTTNA----VTNT------ L +-------2 +--------1pp7_U ! TT----KATTQTTG--LTRTKAFTYT L +---------------------2p7c_B |
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updated Sun Aug 3 07:48:57 2025