| structure name | CRYSTAL STRUCTURE OF A PRE-CLEAVAGE MOS1 TRANSPOSOSOME (Mariner Mos1 transposase) |
| reference | 'Nucleic 43 2424 2015 |
| source | Drosophila mauritiana |
| experiment | X-ray (resolution=3.09, R-factor=0.230) |
| structural superfamily | "Winged helix" DNA-binding domain; |
| sequence family | Transposase; |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | KERHKPSQQAS |
Estimated binding specificities ?
| readout + contact |  |
A | 80 6 7 96 0 96 24 24 4 0 66 13 24 24 24 0 0 0 92 C | 6 69 3 0 96 0 24 24 3 83 12 9 24 24 24 0 0 0 0 G | 3 9 86 0 0 0 24 24 3 12 9 9 24 24 24 0 96 0 1 T | 7 12 0 0 0 0 24 24 86 1 9 65 24 24 24 96 0 96 3scan! |
Dendrogram of similar interfaces ?
matrix format------KGECRG--------HCKTPTSTQAQGATSA--RAFG-------------------------------- L +-------------------4u7b_B +-----3 HGSGRGHGRT----------RA--RTSTKGRGTTLGNT------------------------------------ L ! +-------------------1u78_A ! ------------------------------------------------------QG--------ECSCKG---- +--5 +6vdk_A ! ! +----------------------2 --------------------------------------------QT------PAQG--AG----ECRGQG---- L ! ! ! ! +7u32_A ! +-4 +-1 ------------------------------------------------------QG--------ECSGHCQT-- +-6 ! +6rwm_A ! ! ! ------------------------------------------WA----TA----QG--AG----ECRTRC---- L ! ! +-----------------------7jn3_E +-7 ! ----------------------------------------------------RT--NA--FTIA--------RA L ! ! +----------------------------6edb_B +-8 ! ----------------------------------------------RT--SC---------------------- ! ! +----------------------------4n41_B +-9 ! ----------------------------------------------------RC--NG--FTMA--------RT L ! ! +----------------------------6t90_L -10 ! --------FTYAQTNAATRG------------------------------------------------------ L ! +----------------------------6ryd_F ! ----------------------------------------------------RC--NT--FTMA--------RA L +----------------------------4euw_A |
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updated Fri Sep 13 18:47:28 2024