interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF SMAD8_9-MH1 BOUND TO THE GGCGC SITE.
(Mothers against decapentaplegic homolog 9)
referenceKaczmarska et al. 'Computational 19 ? 2021
sourceHomo sapiens
experimentX-ray (resolution=2.46, R-factor=0.195)
structural superfamilySMAD MH1 domain;
sequence familyMH1 domain;
multimeric complexes3kmp_AB 5x6g_AB 5x6m_AB 5x6m_EF 6fzs_AB 6fzt_AB
reference complex6fzs_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRQK

Estimated binding specificities ?

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# IC=3.520 IC/col=0.880 n_of_columns=4 specificity:   
A |   0  19  19   0
C |  96  19  76  96
G |   0  38   0   0
T |   0  20   1   0
scan!

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updated Thu Sep 12 23:27:36 2024