3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

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updated Tue Jan 6 05:04:16 2026

structure name	NUCLEOSOME CORE PARTICLE CROSS-LINKED WITH A HETERO-BINUCLEAR MOLECULE POSSESSING RAPTA AND GOLD(I) 4-(DIPHENYLPHOSPHINO)BENZOIC ACID GROUPS.
reference	Batchelor et al. Angew.Chem.Int.Ed.Engl. 58 15660 2019
source	HOMO SAPIENS
experiment	X-ray (resolution=2.25, R-factor=?)
structural superfamily	Histone-fold;PH domain-like;lambda repressor-like DNA-binding domains;p53-like transcription factors;
reference complex	5o9g_F 6a5l_g 6r8y_H 6upk_H 6x0n_f 7ccr_A 7jzv_N 7lyb_G 7nkx_f 7u0g_M 7vdt_B 7xzx_N 8txv_G 8u14_G 8upf_G 8wg5_E
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6iq4_A interface=3,28,46, phRyrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera > 6iq4_B interface=25, vlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg > 6iq4_C interface= aktrssraglqfpvgrvhrllrkgNyservgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk > 6iq4_D interface= rsrkesysiyvykvlkqvhpdtgiSskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak > 6iq4_E interface=3,4,28,46, phRYrpgtvalreirryqkstellirkLpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirgera > 6iq4_F interface=30, krhrkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg > 6iq4_G interface=29, aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpkk > 6iq4_H interface=3,9, rsRkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak