7ccr_A : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	STRUCTURE OF THE 2:2 CGAS-NUCLEOSOME COMPLEX
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	4x23_ABCDEFG 4x23_KLMNOPQ 6ipu_ABCDEFGH 6iq4_ABCDEFGH 6jxd_ABCDEFGH 6ke9_ABCDEFGH 6l9h_ABCDEFGH 6le9_ABCDEFGH 7ccq_ABCDEFGH 7ccr_ABCDEFGH 7ccr_KV 7ccr_LMNOPQRS 7xd1_ABCDEFGH 8ieg_CDEFGHKL 8wg5_ABCDEFGH
redundant complexes	6ipu_A 7ccq_A 8ieg_K 4x23 6iq4 6jxd 6ke9 6l9h 6le9 7xd1 8ott 8wg5
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7ccr_A interface=1,2,44, RYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger

  
  ----LT--RC                                   +5xm1_A    
                                             +-1 
  ----LT----                       +---------2 +4z5t_A    
                                   !         ! 
  YA--LC----                     +-6         +5mlu_A    
                                 ! ! 
  --------RT                     ! !         +8g57_E    
                               +-7 +---------3 
  --RG------                   ! !           +6pww_K    
                               ! ! 
  --------RA       +-----------8 +------------7ea8_A    
                   !           ! 
  --RC------       !           !     +-------6fq8_A    
                   !           +-----5 
  --------RA     --9                 !    +--7xsx_a    
                   !                 +----4 
  --------RC       !                      +--6qld_f    
                   ! 
  ------KT--   L   +-------------------------7cvo_A

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updated Sat Sep 14 02:02:13 2024