7ccr_A : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	STRUCTURE OF THE 2:2 CGAS-NUCLEOSOME COMPLEX
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	4x23_ABCDEFG 4x23_KLMNOPQ 6ipu_ABCDEFGH 6iq4_ABCDEFGH 6jxd_ABCDEFGH 6ke9_ABCDEFGH 6l9h_ABCDEFGH 6le9_ABCDEFGH 7ccq_ABCDEFGH 7ccr_ABCDEFGH 7ccr_KV 7ccr_LMNOPQRS 7xd1_ABCDEFGH 8ieg_CDEFGHKL 8wg5_ABCDEFGH
redundant complexes	6ipu_A 7ccq_A 8ieg_K 4x23 6iq4 6jxd 6ke9 6l9h 6le9 7xd1 8ott 8wg5
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7ccr_A interface=1,2,44, RYrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger

  
  --RT----           +-----------------------------8grq_A    
                   +-7 
  LCRT----       +-8 +-----------------------------8hr1_E    
                 ! ! 
  --RG----       ! +-----------------------------8ox0_C    
                 ! 
  --RG----       !                              +8txv_G    
                 !               +--------------1 
  --RG----       !               !              +5x0y_G    
               --9       +-------3 
  --RA----       !       !       !             +1zla_C    
                 !     +-4       +-------------2 
  --RA--RA       !     ! !                     +6a5l_g    
                 !  +--5 ! 
  --RG----       !  !  ! +----------------------8jla_C    
                 +--6  ! 
  --RT----          !  +-----------------------8u14_G    
                    ! 
  ----RA--          +--------------------------6g0l_D

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updated Wed Dec 18 08:20:34 2024