Interface of input file ?

interface graph
legend  pdf

footprint
legend

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameSTRUCTURE OF THE 2:2 CGAS-NUCLEOSOME COMPLEX
experimentNMR
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4;
multimeric complexes3a6n_ABCDEFGH 3w98_ABCDEFGH 4x23_ABCDEFG 4x23_KLMNOPQ 5b1l_ABCDEFGH 6ipu_ABCDEFGH 6iq4_ABCDEFGH 6jxd_ABCDEFGH 6ke9_ABCDEFGH 6l9h_ABCDEFGH 6le9_ABCDEFGH 7ccq_ABCDEFGH 7ccr_ABCDEFGH 7ccr_KV 7ccr_LMNOPQRS 7lya_ABCDEFGH 7xd1_ABCDEFGH 7yqk_ABCDEFGH 8ieg_CDEFGHKL 8jla_ABCDEFGH 8wg5_ABCDEFGH
redundant complexes3a6n_A 6ipu_A 7ccq_A 7lya_A 8ieg_K 3w98 4x23 5b1l 6iq4 6jxd 6ke9 6l9h 6le9 7xd1 7yqk 8jla 8ott 8wg5
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
  
  ----RC--             +-----------------------------7ux9_E    
                     +-5 
  ----RT--         +-6 +-----------------------------6px1_A    
                   ! ! 
  ----RA--       +-7 +-----------------------------7e9c_F    
                 ! ! 
  ----RC--       ! +-----------------------------7yqk_C    
                 ! 
  ----RG--     --8                             +8txv_G    
                 !             +---------------1 
  ----RG--       !         +---3               +8upf_G    
                 !         !   ! 
  HGRTRG--       +---------4   +---------------8rbx_V    
                           ! 
  ----RT--                 !                  +8u14_G    
                           +------------------2 
  ----RARA                                    +6a5l_g    
               

home
updated Sat Jan 10 14:31:54 2026