Interface of input file ?

interface graph
legend  pdf

footprint
legend

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameSTRUCTURE OF THE 2:2 CGAS-NUCLEOSOME COMPLEX
experimentNMR
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4;
multimeric complexes4x23_ABCDEFG 4x23_KLMNOPQ 6ipu_ABCDEFGH 6iq4_ABCDEFGH 6jxd_ABCDEFGH 6ke9_ABCDEFGH 6l9h_ABCDEFGH 6le9_ABCDEFGH 7ccq_ABCDEFGH 7ccr_ABCDEFGH 7ccr_KV 7ccr_LMNOPQRS 7xd1_ABCDEFGH 8ieg_CDEFGHKL 8wg5_ABCDEFGH
redundant complexes6ipu_A 7ccq_A 8ieg_K 4x23 6iq4 6jxd 6ke9 6l9h 6le9 7xd1 8ott 8wg5
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
  
  --RT----               +-----------------------------8grq_A    
                       +-5 
  LCRT----           +-6 +-----------------------------8hr1_E    
                     ! ! 
  --RG----         +-7 +-----------------------------5x0y_G    
                   ! ! 
  --RG----       +-8 +-----------------------------8ox0_C    
                 ! ! 
  ----RA--       ! +-----------------------------6g0l_D    
                 ! 
  --RG----       !                               +8txv_G    
               --9                             +-1 
  --RA----       !                  +----------2 +1zla_C    
                 !                  !          ! 
  --RA--RA       !      +-----------3          +6a5l_g    
                 !      !           ! 
  --RG----       +------4           +----------8jla_C    
                        ! 
  --RT----              +----------------------8u14_G    
               

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updated Sun Aug 3 15:47:11 2025