3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

home
updated Mon Jan 5 02:03:57 2026

structure name	THE NUCLEOSOME CONTAINING A TESTIS-SPECIFIC HISTONE VARIANT, HUMAN H3T
reference	Kurumizaka et al. Proc.Natl.Acad.Sci.USA 107 10454 2010
source	HOMO SAPIENS
experiment	X-ray (resolution=2.70, R-factor=?)
structural superfamily	Histone-fold;PH domain-like;lambda repressor-like DNA-binding domains;p53-like transcription factors;
reference complex	5gtc_H 5o9g_F 6a5l_d 6a5l_g 6r8y_H 6upk_H 6x0n_f 7ccr_A 7d1z_H 7jzv_N 7lyb_G 7nkx_f 7scy_H 7u0g_M 7vdt_B 7xzx_N 8h0v_h 8txv_G 8u14_G 8upf_G 8wg5_E
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3a6n_A interface=2,3,28,46, pHRyrpgtvalreirryqkstellirkLpfqrlmreiaqdfktdlRfqssavmalqeacesylvglfedtnlcvihakrvtimpkdiqlarrirger > 3a6n_B interface=24, lrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg > 3a6n_C interface=29,64, aktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktRiiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk > 3a6n_D interface=9, rsrkesysIyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa > 3a6n_E interface=2,3,4,28,46, pHRYrpgtvalreirryqkstellirkLpfqrlmreiaqdfktdlRfqssavmalqeacesylvglfedtnlcvihakrvtimpkdiqlarrirgera > 3a6n_F interface=27, rkvlrdniqgitkpairrlarrggvkRisgliyeetrgvlkvflenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg > 3a6n_G interface=28, ktrssraglqfpvgrvhrllrkgnyseRvgagapvylaavleyltaeilelagnaardnkktriiprhlqlairndeelnkllgrvtiaqggvlpniqavllpk > 3a6n_H interface= srkesysiyvykvlkqvhpdtgisskaMgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa