7ktq_D : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	NUCLEOSOME FROM A DIMERIC PRC2 BOUND TO A NUCLEOSOME
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	7ktq_ABCDEFGH
redundant complexes	7yrd 7yrg
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7ktq_D interface=3, ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak

  
  ------RA--       +-----------------------------6g0l_D    
                   !  
  RT--------       !                        +----9fgq_D    
                   !           +------------2 
  ----RG----       !       +---6            +----5x0y_G    
                 -10       !   ! 
  ----RG----       !   +---7   +-----------------8jla_C    
                   !   !   ! 
  ----RA--RA       !   !   +---------------------6a5l_g    
                   !   ! 
  ----RA----       !   !              +----------1zla_C    
                   +---9       +------3 
  ----RT----           !       !      +----------8grq_A    
                       !  +----5 
  ----RT----           !  !    !                 +8u14_G    
                       !  !    +-----------------1 
  ----RG----           +--8                      +8ox0_C    
                          ! 
  ----RG----              !          +-----------8txv_G    
                          +----------4 
  --LCRT----                         +-----------8hr1_E

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updated Wed Dec 18 09:32:16 2024