7ktq_D : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	NUCLEOSOME FROM A DIMERIC PRC2 BOUND TO A NUCLEOSOME
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	7ktq_ABCDEFGH
redundant complexes	7yrd 7yrg
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7ktq_D interface=3, ktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak

  
  ------RA--       +-----------------------------6g0l_D    
                   !  
  RT--------       !                        +----9fgq_D    
                   !           +------------4 
  ----RG----       !           !            +----5x0y_G    
                   !         +-5 
  ----RA----     -10         ! !                +1zla_C    
                   !      +--6 +----------------3 
  ----RG----       !      !  !                  +8jla_C    
                   !      !  ! 
  ----RT----       !      !  +-------------------8grq_A    
                   !      ! 
  ----RT----       +------9                        +8u14_G    
                          !   +--------------------1 
  ----RG----              ! +-7                    +8ox0_C    
                          ! ! ! 
  --LCRT----              +-8 +--------------------8hr1_E    
                            ! 
  ----RA--RA                !                     +6a5l_g    
                            +---------------------2 
  ----RG----                                      +8txv_G

home
updated Sun Aug 3 16:53:13 2025