Interface of input file ?

interface graph
legend  pdf

footprint
legend

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameSTRUCTURE OF HUMAN APC3LOOP 375-381 BOUND TO THE NCP
experimentNMR
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4;
multimeric complexes9fgq_ABCDEFGH
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
  
  --------RA----       +-----------------------------6g0l_D    
                       !  
  --IT----------       !                       +------3wkj_D    
                       !            +----------7 
  ------RG------       !            !          +------5x0y_G    
                       !     +-----12  
  ------RA------       !     !      !                  +1zla_C    
                       !     !      !  +---------------3 
  ------RG------       !     !      +-10               +8ox0_C    
                       !  +-15         !  
  ------RG------     -19  !  !         +---------------8jla_C    
                       !  !  !  
  ------RT------       !  !  !                        +7kbd_C    
                       !  !  +------------------------1 
  ------RA----RA       !  !                           +6a5l_g    
                       !  !  
  ----------KG--       !  !                               +---7nkx_f    
                       !  !              +----------------5 
  LA----RG------       !  !              !                +---7unc_a    
                       !  !           +-13  
  LT----RC------       !  !           !  !                    +3kwq_E    
                       +-18           !  !     +--------------2 
  ------RT------          !           !  +-----9              +8grq_A    
                          !           !        ! 
  ------RT------          !           !        +--------------7zs9_e    
                          !     +----14  
  ------RC------          !     !     !                +---7xyf_B    
                          !     !     !          +-----6 
  ------RG------          !     !     !          !     +---6iy2_A    
                          !     !     !    +-----8 
  ------RG------          !  +-16     !    !     !         +7ccr_A    
                          !  !  !     +---11     +---------4 
  LC----RT------          !  !  !          !               +8hr1_E    
                          !  !  !          !  
  LT----RC------          +-17  !          +---------------4xzq_E    
                             !  !  
  ----KT--------   L         !  +--------------------------7cvo_A    
                             !  
  QC----RG------             +---------------------------7y7i_E    
                     

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updated Mon Aug 4 02:49:25 2025