3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameNUCLEOSOME FROM A DIMERIC PRC2 BOUND TO A NUCLEOSOME
(HISTONE H3)
sourceXENOPUS LAEVIS
experimentNMR
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4;
multimeric complexes6r1t_ABCDEFGH 7ktq_ABCDEFGH 7xd0_ABCDEFGHKL
redundant complexes6r1t 7xd0
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
  
  RG--       +-----------------------------8jh2_e    
             ! 
  --RA     --3                          +--7xsx_a    
             !            +-------------1 
  --RT       +------------2             +--8u14_G    
                          ! 
  --RG                    +----------------8txv_G

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updated Sat Sep 14 03:01:42 2024