| structure name | STRUCTURE OF CDX1 BOUND TO HYDROXYMETHYLATED DNA (Homeobox protein CDX-1) |
| reference | Morgunova et al. 'To ? ? ? |
| source | Homo sapiens |
| experiment | X-ray (resolution=2.78, R-factor=0.220) |
| structural superfamily | Homeodomain-like; |
| sequence family | Homeobox domain; |
| redundant complexes |  5lux_K
|
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | YRKIQN |
Estimated binding specificities ?
| contact |  |
A | 0 0 0 96 17 0 24 17 C | 0 0 0 0 10 8 24 43 G | 0 0 0 0 17 80 24 17 T | 96 96 96 0 52 8 24 19scan! |
Dendrogram of similar interfaces ?
matrix formatRT--VTKGNA--KA-- L +-----------------------------2lkx_A ! RTQTVAQTNA------ L ! +8osb_E ! +-1 RT--IAQCNAMG---- L ! +---------2 +1b72_A --6 ! ! ----NCICRG------ L ! +----------3 +--4xrm_B ! ! ! RC--IAQCNAYC---- L ! +-4 +------------3rkq_B ! ! ! ----VTCCNAQA--RT L +---5 +-----------------------8g87_X ! ----------YCFAKC +-------------------------6pe2_B |
home
updated Sat Sep 14 04:26:40 2024