| structure name | STRUCTURE OF CDX1 BOUND TO HYDROXYMETHYLATED DNA (Homeobox protein CDX-1) |
| reference | Morgunova et al. 'To ? ? ? |
| source | Homo sapiens |
| experiment | X-ray (resolution=2.78, R-factor=0.220) |
| structural superfamily | Homeodomain-like; |
| sequence family | Homeobox domain; |
| redundant complexes |  5lux_K
|
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | YRKIQN |
Estimated binding specificities ?
| contact |  |
A | 15 5 6 55 0 96 96 96 C | 50 10 5 15 0 0 0 0 G | 16 71 5 15 0 0 0 0 T | 15 10 80 11 96 0 0 0scan! |
Dendrogram of similar interfaces ?
matrix formatRT--VTKGNA--KA-- L +-----------------------------2lkx_A ! RTQTVAQTNA------ L ! +8osb_E ! +--------------1 RT--IAQCNAMG---- L +-5 +----2 +1b72_A ! ! ! ! ----NCICRG------ L ! ! +--3 +---------------4xrm_B ! ! ! ! RC--IAQCNAYC---- L --6 +-----4 +--------------------3rkq_B ! ! ----VTCCNAQA--RT L ! +-----------------------8g87_X ! ----------YCFAKC L +-----------------------------6pe2_B |
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updated Wed Dec 18 11:03:52 2024