| structure name | UPDATED CRYSTAL STRUCTURE OF REPLICATION INITIATOR PROTEIN REPE54. (REPLICATION INITIATION PROTEIN) |
| reference | Ward et al. |
| source | ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) |
| experiment | X-ray (resolution=1.89, R-factor=0.210) |
| structural superfamily | "Winged helix" DNA-binding domain; |
| sequence family | Initiator Replication protein; |
| multimeric complexes | 2z9o_AB |
| redundant complexes | 1rep_C
2z9o_A
7sdp_C
7sgc_C
7soz_C
7spm_C
7u6k_C
 7u7o_C
7ufx_C
7uog_C
7ur0_C
7uv6_C
7uv7_C
7uxy_C
8d86_C
8d8m_C
8tip_C
8tiq_C
8tir_C
8tis_C
8tit_C
8tiu_C
8tiv_C
8tiw_C
8tix_C
8tiy_C
8tiz_C
8tj0_C
8tj1_C
|
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | SAESKRRSYRPDRRR |
Estimated binding specificities ?
| readout + contact |  |
A | 0 6 72 12 0 0 0 24 24 24 24 0 0 0 0 96 0 96 24 12 C | 6 6 12 18 0 0 90 24 24 24 24 0 0 0 96 0 96 0 24 6 G | 0 78 6 60 96 96 0 24 24 24 24 0 96 0 0 0 0 0 24 78 T | 90 6 6 6 0 0 6 24 24 24 24 96 0 96 0 0 0 0 24 0scan! |
Dendrogram of similar interfaces ?
matrix format--SGAAECSAKGRG------RG--STYGRTPGDCRGRGRC L +-------------------7rva_C +----2 ----RTTCDTSCSGKG--RT-------------------- L +-3 +-------------------5x5l_H ! ! ----------------YG---------------------- +-4 +------------------------2heo_D ! ! DCSA--TATT----RT------RA---------------- L ! ! +1z9c_A --5 +-------------------------1 TT--PTTCSTNT----------RT---------------- L ! +4lln_I ! ----RGRGYC------------------------------ L +---------------------------1cf7_A |
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updated Tue Dec 19 20:38:21 2023