| structure name | UPDATED CRYSTAL STRUCTURE OF REPLICATION INITIATOR PROTEIN REPE54. (REPLICATION INITIATION PROTEIN) |
| reference | Ward et al. |
| source | ESCHERICHIA COLI (STRAIN K12) / ESCHERICHIA COLI (STRAIN K12) |
| experiment | X-ray (resolution=1.89, R-factor=0.210) |
| structural superfamily | "Winged helix" DNA-binding domain; |
| sequence family | Initiator Replication protein; |
| multimeric complexes | 2z9o_AB |
| redundant complexes | 1rep 2z9o 7sdp 7sgc 7soz 7spm 7u6k 7u7o 7ufx 7uog 7ur0 7uv6 7uv7 7uxy 8d86 8d8m 8tip 8tiq 8tir 8tis 8tit 8tiu 8tiv 8tiw 8tix 8tiy 8tiz 8tj0 8tj1 |
| reference complex | 8ac8_C |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | SAESKRRSYRPDRRR |
Estimated binding specificities ?
| readout + contact |  |
A | 0 24 0 0 0 0 96 0 96 24 24 24 24 12 0 0 8 16 5 90 C | 79 24 0 0 0 0 0 96 0 24 24 24 24 0 96 96 67 5 79 1 G | 1 24 0 96 0 96 0 0 0 24 24 24 24 84 0 0 16 11 7 5 T | 16 24 96 0 96 0 0 0 0 24 24 24 24 0 0 0 5 64 5 0scan! |
Dendrogram of similar interfaces ?
matrix format--SGAAECSAKGRG------RG--STYGRTPGDCRGRGRC L +-------------------7rva_C +----2 ----RTTCDTSCSGKG--RT-------------------- L +-3 +-------------------5x5l_H ! ! ----------------YG---------------------- +-4 +------------------------2heo_D ! ! DCSA--TATT----RT------RA---------------- L ! ! +1z9c_A --5 +-------------------------1 TT--PTTCSTNT----------RT---------------- L ! +4lln_I ! ----RGRGYC------------------------------ L +---------------------------1cf7_A |
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updated Fri Sep 13 07:34:18 2024