| structure name | STRUCTURAL BASIS OF DNA RECOGNITION BY THE HETERODIMERIC CELL CYCLE TRANSCRIPTION FACTOR E2F-DP (PROTEIN TRANSCRIPTION FACTOR E2F-4) |
| reference | Pavletich et al. 'Genes 13 666 1999 |
| source | HOMO SAPIENS |
| experiment | X-ray (resolution=2.60, R-factor=?) |
| structural superfamily | "Winged helix" DNA-binding domain; |
| sequence family | E2F/DP family wingedhelix DNAbinding domai; |
| multimeric complexes | 1cf7_AB |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | RRRY |
Estimated binding specificities ?
| readout + contact |  |
A | 0 0 0 0 16 24 72 C | 96 0 96 0 56 16 8 G | 0 96 0 96 16 48 16 T | 0 0 0 0 8 8 0scan! |
Related DNA sequences reported in the literature ?
| site | source | matches (E-value) |
|---|---|---|
| term: E2F-4 | ||
| CTCCGCGC | PubMed | 1cf7_A(1.86e-04), 1cf7_AB(1.66e-04) |
Dendrogram of similar interfaces ?
matrix format------------NGSA--RGHGSC------------ L +6el8_A +-----------------1 ------------NAST--RGHTSTFT---------- L ! +1vtn_C +------3 --NTHG--RT--YTPT------------------RT L ! ! +----6qil_A +----4 +------------2 ------------NAST--RTHTSTLT---------- L ! ! +----4lg0_A +-5 ! --------------RC----YG------KT------ ! ! +------------------------2acj_B +-6 ! --------ST--TAQC-------------------- ! ! +-----------------------------8b4b_W +-7 ! ------HT----RTITYT------------------ L ! ! +-----------------------------4kfc_B +-8 ! ----RGTC--DCVA----RGRC--------RC---- L ! ! +-----------------------------8hih_Q --9 ! --STRGQTQA--ST------------HG----KT-- L ! +-----------------------------7t8k_B ! RA---------------------------------- L +-----------------------------8ac8_C |
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updated Sat Jan 10 04:30:52 2026