| structure name | STRUCTURAL BASIS OF DNA RECOGNITION BY THE HETERODIMERIC CELL CYCLE TRANSCRIPTION FACTOR E2F-DP (PROTEIN TRANSCRIPTION FACTOR E2F-4) |
| reference | Pavletich et al. 'Genes 13 666 1999 |
| source | HOMO SAPIENS |
| experiment | X-ray (resolution=2.60, R-factor=?) |
| structural superfamily | "Winged helix" DNA-binding domain; |
| sequence family | E2F/DP family wingedhelix DNAbinding domai; |
| multimeric complexes | 1cf7_AB |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | RRRY |
Estimated binding specificities ?
| readout + contact |  |
A | 12 6 12 6 0 0 0 0 C | 12 12 54 6 90 0 96 0 G | 6 0 18 84 6 96 0 96 T | 66 78 12 0 0 0 0 0scan! |
Related DNA sequences reported in the literature ?
| site | source | matches (E-value) |
|---|---|---|
| term: E2F-4 | ||
| CTCCGCGC | PubMed | 1cf7_A(1.86e-04), 1cf7_AB(1.66e-04) |
Dendrogram of similar interfaces ?
matrix format------------NGSA--RGHGSC-------- L +-----------------------------6el8_A +-1 --------ST--TAQC---------------- +-2 +-----------------------------8b4b_W ! ! ------HT----RTITYT-------------- L +-3 +-----------------------------4kfc_B ! ! ----RGTC--DCVA----RGRC----RC---- L +-4 +-----------------------------8hih_Q ! ! --STRGQTQA--ST----------HG--KT-- L +-5 +-----------------------------7t8k_B ! ! RA------------------------------ L --6 +-----------------------------8ac8_C ! --NTHG--RT--YTPT--------------RT L +-----------------------------6qil_A |
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updated Sun Aug 3 05:25:00 2025