| structure name | STRUCTURAL BASIS OF DNA RECOGNITION BY THE HETERODIMERIC CELL CYCLE TRANSCRIPTION FACTOR E2F-DP (PROTEIN TRANSCRIPTION FACTOR E2F-4) |
| reference | Pavletich et al. 'Genes 13 666 1999 |
| source | HOMO SAPIENS |
| experiment | X-ray (resolution=2.60, R-factor=?) |
| structural superfamily | "Winged helix" DNA-binding domain; |
| sequence family | E2F/DP family wingedhelix DNAbinding domai; |
| multimeric complexes | 1cf7_AB |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | RRRY |
Estimated binding specificities ?
| readout + contact |  |
A | 11 17 8 0 0 0 0 C | 8 69 8 87 0 96 0 G | 8 10 69 8 96 0 96 T | 69 0 11 1 0 0 0scan! |
Related DNA sequences reported in the literature ?
| site | source | matches (E-value) |
|---|---|---|
| term: E2F-4 | ||
| CTCCGCGC | PubMed | 1cf7_A(1.86e-04), 1cf7_AB(1.66e-04) |
Dendrogram of similar interfaces ?
matrix format--------ST--TAQC------------------------ +8b4b_W +----------------2 --------------NC----ITNA--RGRG---------- L +--------5 +6fqq_E ! ! --STRGQTQA--ST----------------HG----KT-- L +--7 +----------------7t8k_B ! ! --------------RC----YG----------KT------ ! ! +---2acj_B ! +---------------------3 ----RGTC--DCVA----RGRC------------RC---- L +-8 +---8hih_Q ! ! ------------NGSA--RGHG--SC-------------- L ! ! +6el8_A ! ! +-----------------1 ------------NAST--RGHT--STFT------------ L ! ! ! +1vtn_C +-9 +----------6 --NTHG--RT--YTPT----------------------RT L ! ! ! +----6qil_A ! ! +------------4 ------------NAST--RTHT--STLT------------ L -10 ! +----4lg0_A ! ! ------HT----RTITYT---------------------- L ! +-----------------------------4kfc_B ! RA-------------------------------------- L +-----------------------------8ac8_C |
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updated Mon Jun 29 14:05:02 2026