7wlr_B : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	CRYO-EM STRUCTURE OF THE NUCLEOSOME CONTAINING KOMAGATAELLA PASTORIS HISTONES
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4; TATA box binding protein associated factor ;
multimeric complexes	7wlr_ABCDEFGH
links to other resources	NAKB PDIdb DNAproDB

  
  --RC----                                +6qld_f    
                                 +--------6 
  --RT----                       !        ! +8u14_G    
                                 !        +-1 
  --RG----                     +-7          +8ox0_C    
                               ! ! 
  --RG----                     ! !         +8txv_G    
                           +---8 +---------2 
  --RG----                 !   !           +5x0y_G    
                           !   ! 
  --RA----                 !   !           +1zla_C    
                           !   +-----------4 
  --RA--RA              +-10               +6a5l_g    
                        !  !  
  LARG----              !  !                +7unc_a    
                        !  ! +--------------3 
  --RT----              !  ! !              +8grq_A    
                    +--11  +-9 
  LC------          !   !    !             +8bvw_e    
                    !   !    +-------------5 
  LCRT----       +-12   !                  +8hr1_E    
                 !  !   !  
  ----RA--       !  !   +-----------------6g0l_D    
               -13  !  
  --RG----       !  +---------------------8jla_C    
                 !  
  --RA----       +-----------------------7xsx_a

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updated Wed Dec 18 13:50:24 2024