7yqk_E : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	CRYO-EM STRUCTURE OF GAMMAH2AXK15UB-H4K20ME2 NUCLEOSOME BOUND TO 53BP1
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	7yqk_ABCDEFGH
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7yqk_E interface=5,48, kkphRyrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlRfqssavmalqeaceaylvglfedtnlcaihakrvtimpkdiqlarrirger

  
  RG--------                                  +8jh2_e    
                               +--------------3 
  RG--RT----          +--------6              +8grq_A    
                      !        ! 
  RGLCRT----          !        +---------------8hr1_E    
                      !  
  ----RA----       +-10                +-------8rbx_M    
                   !  !     +----------5 
  ------RA--       !  ! +---7          +-------6g0l_D    
                   !  ! !   ! 
  ----RG----       !  +-8   +------------------8jla_C    
                   !    ! 
  ----RA----     -11    !                     +1zla_C    
                   !    +---------------------4 
  ----RG----       !                          +8ox0_C    
                   !  
  ----RT----       !                         +8u14_G    
                   !  +----------------------1 
  ----RG----       !  !                      +5x0y_G    
                   +--9 
  ----RA--RA          !                      +6a5l_g    
                      +----------------------2 
  ----RG----                                 +8txv_G

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updated Sun Aug 3 21:40:59 2025