8grq_H : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	CRYO-EM STRUCTURE OF BRCA1/BARD1 BOUND TO H2AK127-UBCH5C-UB NUCLEOSOME
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	8grq_ABCDEFGH
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 8grq_H interface=3, rsRkesysvyvykvlkqvhpdtgisskamgimnsfvndiferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsa

  
  ------RA--       +-----------------------------6g0l_D    
                   !  
  RT--------       !                        +----9fgq_D    
                   !           +------------4 
  ----RG----     -10    +------6            +----5x0y_G    
                   !    !      ! 
  ----RG----       !    !      +-----------------8jla_C    
                   !    ! 
  ----RA--RA       !    !                        +6a5l_g    
                   +----9   +--------------------2 
  ----RG----            ! +-7                    +8txv_G    
                        ! ! ! 
  ----RT----            ! ! +--------------------8grq_A    
                        ! ! 
  ----RT----            +-8                        +8u14_G    
                          !                      +-1 
  ----RA----              !    +-----------------3 +1zla_C    
                          !    !                 ! 
  ----RG----              +----5                 +8ox0_C    
                               ! 
  --LCRT----                   +-----------------8hr1_E

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updated Mon Aug 4 00:18:42 2025