| structure name | DIPHTHERIA TOX REPRESSOR (C102D MUTANT) COMPLEXED WITH NICKEL AND DTXR CONSENSUS BINDING SEQUENCE (DIPHTHERIA TOXIN REPRESSOR) |
| reference | Murphy et al. Biochemistry 39 10397 2000 |
| source | Corynebacterium diphtheriae |
| experiment | X-ray (resolution=3.00, R-factor=0.245) |
| structural superfamily | "Winged helix" DNA-binding domain;Iron-dependent repressor protein, dimerization domain; |
| sequence family | Iron dependent repressor, Nterminal D; Iron dependent repressor, metal bindin; MarR family; |
| multimeric complexes | 1f5t_ABCD |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | SPTQR |
Estimated binding specificities ?
| contact |  |
A | 11 0 9 9 C | 9 0 67 9 G | 67 96 9 11 T | 9 0 11 67scan! |
Related DNA sequences reported in the literature ?
| site | source | matches (E-value) |
|---|---|---|
| term: DTXR | ||
| TTAGGTGAGACGCACCCAT | PubMed | 1f5t_ABCD(1.22e-03) |
Dendrogram of similar interfaces ?
matrix format----RGSTRTSTHG------------ L +3zpl_B +-----------------------------1 --DCLT--AGTTRG--RG-------- L +-2 +5h3r_A ! ! TT----KATTQTTGLTRTKA--FTYT L +-3 +-----------------------------2p7c_B ! ! --SG--PTPGTT--------HG---- L --4 +-----------------------------7d98_Q ! --------------YG---------- +-----------------------------3eyi_B |
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updated Fri Sep 13 15:35:45 2024