structure name | CRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN AND C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTER (CCAATENHANCER BINDING PROTEIN BETA) |
reference | Tahirov et al. |
source | HOMO SAPIENS |
experiment | X-ray (resolution=3.00, R-factor=0.244) |
structural superfamily | Leucine zipper domain; |
sequence family | Basic region leucine zipper; bZIP transcription factor; |
multimeric complexes | 1hjb_ABC 1hjb_DEF |
links to other resources | NAKB PDIdb DNAproDB |
protein sequence | |
interface signature | RNAVSR |
Estimated binding specificities ?
contact |
A | 0 0 13 0 16 C | 0 0 16 96 54 G | 0 0 13 0 13 T | 96 96 54 0 13scan! |
Dendrogram of similar interfaces ?
matrix format--RANT----AAVT--STRG---------------- L +-1hjb_A +---------------3 ----NCRT--ATAT--STRG---------------- ! +-1t2k_D +---6 --------RG----NC----YGAT------RC---- L ! ! +4eot_A ! ! +------1 --------RG----NC----YGAT----CTRG---- L ! +---------5 +2wt7_B ! ! ----QC----FTRC---------------------- L --7 +-------7aw7_D ! ------------------NT----ATAT----STRG L ! +-1dh3_C ! +-2 ----NC----AT----STRA---------------- +------------------4 +-1a02_J ! NCTTAT------RG---------------------- L +--2dgc_A |
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updated Thu Dec 22 17:35:01 2022