| structure name | SOLUTION STRUCTURE OF A SPECIFIC DNA COMPLEX OF THE MYB DNA-BINDING DOMAIN WITH COOPERATIVE RECOGNITION HELICES (C-MYB DNA-BINDING DOMAIN) |
| source | MUS MUSCULUS |
| experiment | NMR |
| structural superfamily | Homeodomain-like; |
| sequence family | Myblike DNAbinding domain; |
| redundant complexes |  1msf_C
|
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | KRENDNKNNST |
Estimated binding specificities ?
readout + contact |  |
A | 0 0 96 0 13 0 96 16 C | 0 96 0 0 16 0 0 13 G | 0 0 0 96 13 0 0 54 T | 96 0 0 0 54 96 0 13scan! |
Dendrogram of similar interfaces ?
matrix format------KG--RCEC--NA------DCNCKANANTSTTC L +1mse_C +--------2 ------KG--RAEA----------DCNAKGNANTST-- L ! +3zqc_A +----3 ------KG--RGLC------------NAKGNANTTC-- L ! ! +6kks_A +----6 +---------1 ------KG--RTEC------------NAKGNANTST-- ! ! +1h89_C ! ! --NA--RTQT--EC------------NG--NA------ L +------7 +--------------2kdz_A ! ! KT----RG--RTDC----YA------ITKGNAVT---- L ! ! +-----------3osg_A +-8 +-------4 ----------------------RTRCET--SAQAKT-- L ! ! +-----------6qec_A ! ! ------KG--RTEC------------NAKGNANTST-- --9 +--------------------------1h8a_C ! ------KG--YGHTRTRC--------NCRGDCRGDC-- L ! +-------------5eyb_B +------------5 RT--STVTMC----------KG---------------- L +-------------1iv6_A |
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updated Fri Sep 13 15:50:56 2024