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legend  pdf

structure nameCRE-LOXP SYNAPTIC STRUCTURE
(Recombinase cre)
referenceVan Duyne et al. 'To ? ? ?
sourceBacteriophage P1
experimentX-ray (resolution=2.20, R-factor=0.194)
structural superfamilyDNA breaking-rejoining enzymes;lambda integrase-like, N-terminal domain;
sequence familyPhage integrase family;
multimeric complexes1kbu_AB 1ma7_AB 1nzb_AB 1pvp_AB 1pvq_AB 1pvr_AB 1xo0_AB 2hof_AB 2hoi_GH 3c28_AB 3c29_AB 4crx_AB 5crx_AB 7rhx_AB 7rhz_AB
reference complex7rhx_G
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureHTKMSKTQQKSRERNI

Estimated binding specificities ?

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# IC=12.785 IC/col=0.609 n_of_columns=21 specificity:   
A |  14  24  24  24  24  24  24   0   0  96   0  96   0   0  75  24  24  24   7  88   1
C |   7  24  24  24  24  24  24  96   0   0   0   0  96   0   7  24  24  24   7   1   7
G |  16  24  24  24  24  24  24   0   0   0   0   0   0  96   7  24  24  24  14   7   0
T |  59  24  24  24  24  24  24   0  96   0  96   0   0   0   7  24  24  24  68   0  88
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updated Thu Jan 8 21:15:50 2026