interface graph thumbnail
legend  pdf

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameCRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CORE PARTICLE LACKING H4 N- TERMINAL REGION
(HISTONE H4)
referenceKurumizaka et al. 'FEBS 3 363 2013
sourceHOMO SAPIENS
experimentX-ray (resolution=3.00, R-factor=?)
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4;
multimeric complexes3w99_ABCDEFGH
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
  
  --RT----                                    +8u14_G    
                               +--------------1 
  --RG----                     !              +5x0y_G    
                          +----5 
  --RA----                !    !              +1zla_C    
                      +---7    +--------------3 
  --RG----            !   !                   +8ox0_C    
                    +-9   ! 
  LCRT----          ! !   +-------------------8hr1_E    
                    ! ! 
  --RG----          ! +-----------------------8jla_C    
                 +-10  
  --RA--RA       !  !                        +6a5l_g    
                 !  !   +--------------------2 
  --RG----       !  +---8                    +8txv_G    
               -11      ! 
  --RT----       !      +--------------------8grq_A    
                 !  
  --RA----       !        +-----------------8rbx_M    
                 +--------6 
  --RG--RG                !           +-----8kcb_A    
                          +-----------4 
  ----RA--                            +-----6g0l_D    
               

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updated Sun Aug 3 07:39:00 2025