interface graph thumbnail
legend  pdf

structure nameSTRUCTURES OF THE NO FACTOR SLMA BOUND TO DNA AND THE CYTOSKELETAL CELL DIVISION PROTEIN FTSZ
(Nucleoid occlusion factor SlmA)
referenceSchumacher et al. Proc.Natl.Acad.Sci.USA 113 4988 2016
sourceVibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) / Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) / Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
experimentX-ray (resolution=1.89, R-factor=0.193)
structural superfamilyHomeodomain-like;Tetracyclin repressor-like, C-terminal domain;
sequence familyBacterial regulatory proteins, tetR family;
multimeric complexes4gct_ABCD 5haw_AB
redundant complexes4gct_D
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  TA----ECAC--YCRA                             +5haw_A    
                                             +-1 
  VT--AGDT--TTYTLA   L             +---------2 +5gpc_B    
                                   !         ! 
  ----TTRG----YTWA   L   +---------4         +-7jnp_A    
                         !         ! 
  LC--RTPTPTSTYT--   L   !         +-----------6nsn_B    
                       --6 
  MTRGTGPT--ATYTWT   L   !                +----5yej_B    
                         !        +-------3 
  MTRG------------   L   +--------5       +----5fmp_B    
                                  ! 
  ----TGKG----YCFA   L            +------------4pxi_B    
                       

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updated Fri Sep 13 19:44:33 2024