| structure name | CRYSTAL STRUCTURE OF BIOQ WITH ITS NATUREL DOUBLE-STRANDED DNA OPERATOR (TetR family transcriptional regulator) |
| reference | Guan et al. 'Biochim 1862 1843 2018 |
| source | Mycobacterium smegmatis |
| experiment | X-ray (resolution=2.70, R-factor=0.214) |
| structural superfamily | Tetracyclin repressor-like, C-terminal domain;Homeodomain-like; |
| sequence family | Bacterial regulatory proteins, tetR family; Tetracyclin repressor, Cterminal allalpha 12; |
| multimeric complexes | 5yej_BC |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | MRTPAYW |
Estimated binding specificities ?
| contact |  |
A | 0 0 0 9 7 73 73 0 C | 96 0 0 7 73 7 9 0 G | 0 96 0 7 9 9 7 96 T | 0 0 96 73 7 7 7 0scan! |
Dendrogram of similar interfaces ?
matrix formatMTRGTGPT--ATYTWT-------------------- L +-----5yej_B ! VT--AGDT--TTYTLA-------------------- L +-------4 +5gpc_B ! ! +-1 ----TTRG----YTWA-------------------- L ! +---3 +7jnp_A +--5 ! LTRG--PTAC--YT---------------------- L ! ! +-3lsr_A ! ! MTRGAAVT--TTYT---------------------- L +----------6 ! +-5fmp_B ! ! +-----------2 LC--RTPTPTSTYT---------------------- L ! ! +-6nsn_B +-7 ! ----TGKG----YCFA-------------------- L ! ! +----------------4pxi_B --8 ! --------------------------ECRGRCPTRG L ! +---------------------------7w27_C ! LG--------------TAKGTAHTRG---------- L +----------------------------6jhe_A |
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updated Fri Sep 13 21:02:33 2024