| structure name | HLRH-1 DNA BINDING DOMAIN - 12BP OCT4 PROMOTER COMPLEX (Nuclear receptor subfamily 5 group A member 2) |
| reference | Tuntland et al. 'J. 428 4981 2016 |
| source | Homo sapiens |
| experiment | X-ray (resolution=2.20, R-factor=0.158) |
| structural superfamily | Glucocorticoid receptor-like DNA-binding domain; |
| sequence family | Zinc finger, C4 type two domains; |
| redundant complexes | 2a66 |
| reference complex | 2a66_A |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | EKKRRR |
Estimated binding specificities ?
readout + contact |  |
A | 0 78 24 0 0 0 18 0 52 C | 0 8 24 96 96 0 17 0 17 G | 0 0 24 0 0 0 0 96 17 T | 96 10 24 0 0 96 61 0 10scan! |
Dendrogram of similar interfaces ?
matrix format--ECKG--KGRG--RCRC L +----------------------2ff0_A ! CAECKG--KGRG------ L ! +----6l6q_B ! +-------6 ----KGVT--RG------ --9 ! +----5emp_A ! ! --DGKG--RTRG------ L ! ! +3cbb_A ! ! +-1 --EAKG--RTRTRT---- +---------8 +--2 +4umm_E ! ! ! --EAKG--RTRTRT---- ! ! +2han_B ! +---5 ----KAVA--RA------ L ! ! ! +5e69_A ! ! ! +-3 --ECKG--KGRG------ +-----7 +--4 +3dzy_A ! ! --ETKGAT--RG------ L ! +1lat_A ! --ECKG--RGRG------ L +------3dzy_D |
home
updated Tue Dec 17 02:12:43 2024