structure name | CRYSTAL STRUCTURE OF BACILLUS SUBTILIS PADR IN COMPLEX WITH OPERATOR DNA (Transcriptional regulator) |
reference | Park et al. 'Nucleic 45 13080 2017 |
source | Bacillus subtilis subsp. spizizenii strain W23 |
experiment | X-ray (resolution=2.65, R-factor=0.230) |
structural superfamily | "Winged helix" DNA-binding domain; |
sequence family | Transcriptional regulator PadRlike family; |
multimeric complexes | 5x11_AB 5x11_CD 5x11_EFGH |
links to other resources | NAKB PDIdb DNAproDB |
protein sequence | |
interface signature | YKHSQYPL |
Estimated binding specificities ?
contact |
A | 9 57 0 0 0 96 96 59 C | 78 11 0 0 0 0 0 9 G | 0 9 0 96 0 0 0 9 T | 9 19 96 0 96 0 0 19scan! |
Dendrogram of similar interfaces ?
matrix format--------------NASTRGHT--STLT------ L +-------7cby_C +-----------1 RT--LANTHGTTETYTRG---------------- L +---------2 +-------1f4k_B ! ! --TT------KATTQTTG--LTRT----KAFTYT L --3 +-------------------2p7c_B ! --------------------YG------------ +-----------------------------3eyi_B |
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updated Fri Sep 13 20:53:22 2024