5zdz_C : 3D-footprint complex

structure name	HAIRPIN FORMING COMPLEX, RAG1/2-NICKED 12RSS/23RSS COMPLEX IN CA2+
reference	Chuenchor et al. 'Mol. 70 358 2018
experiment	X-ray (resolution=2.80, R-factor=0.204)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 5zdz_C interface=59,466,468,471,575,579,582, hinkggrprqhllsltrraqkhrlrelkiqvkefadkeeggdvkavcltlfllalrarNehrqadeleaimqgrgsglqpavclairvntflscsqyhkmyrtvkaitgrqifqplhalrnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekhgsgpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleasgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlkpimrmNgNfaRklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawasEgneSgnKlfrrfrkmnarqskcyemedvlkhhwlytskylqkfmnahn
interface signature	NNNRESK

Estimated binding specificities ?

readout + contact

# IC=3.101 IC/col=0.124 n_of_columns=25

specificity:

A |  96   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  54  13
C |   0  96  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  16  16
G |   0   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  13  54
T |   0   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  13  13

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updated Tue Dec 17 03:11:33 2024