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legend  pdf

structure nameSTRUCTURE OF ABDB/EXD COMPLEX BOUND TO A 'MAGENTA14' DNA SEQUENCE
(HOMEOBOX PROTEIN EXTRADENTICLE)
referenceBaburajendran et al. 'Cell 24 2221 2018
sourceDROSOPHILA MELANOGASTER
experimentX-ray (resolution=3.03, R-factor=0.270)
structural superfamilyHomeodomain-like;
sequence familyHomeobox domain;
multimeric complexes1b8i_AB 2r5y_AB 2r5z_AB 4cyc_AB 4uus_AB 4uus_EF 5zjq_AB 5zjr_AB 5zjs_AB
reference complex4cyc_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRRNNIR

Estimated binding specificities ?

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# IC=3.414 IC/col=0.569 n_of_columns=6 specificity:   
A |  14  56   0   0  60  19
C |  13  13   1  96  12  19
G |  13  16   1   0  12  20
T |  56  11  94   0  12  38
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updated Fri Jan 9 05:17:07 2026