6iy2_H : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	STRUCTURE OF SNF2-MMTV-A NUCLEOSOME COMPLEX AT SHL2 IN ADP STATE
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	6iy2_ABCDEFGHO
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6iy2_H interface=5, rrktRkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak

  
  RG--------           +-----------------------------7k63_H    
                     +-7 
  RG--------         ! +-----------------------------3x1t_H    
                   +-8 
  --------RC       ! !                         +---6qld_f    
                   ! +-------------------------4 
  --------RA       !                           +---7xsx_a    
                   ! 
  --LC------       !                               +5mlu_A    
                 --9                             +-2 
  --------RT       !                             ! +8g57_E    
                   !                     +-------3 
  ----LT--RC       !                     !       ! +5xm1_A    
                   !       +-------------5       +-1 
  --LT------       !       !             !         +4z5t_A    
                   +-------6             ! 
  --------RA               !             +-------7ea8_A    
                           ! 
  ------KT--   L           +---------------------7cvo_A

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updated Tue Dec 19 13:14:42 2023