6oeo_C : 3D-footprint complex

structure name	CRYO-EM STRUCTURE OF MOUSE RAG1/2 NFC COMPLEX (DNA1) (VDJ RECOMBINATION-ACTIVATING PROTEIN 1)
source	MUS MUSCULUS
experiment	NMR
multimeric complexes	6oem_BH 6oem_DN 6oen_ADN 6oen_BCH 6oeo_AB 6oeo_CD 6oep_AC 6oeq_AC 6oer_AB 6oer_CDH
reference complex	6oem_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6oeo_C interface=51,329,452,454,455,456,458, rqhllsltrraqkhrlrelkiqvkefadkeeggdvkavcltlfllalrarNehrqadeleaimqgrgsglqpavclairvntflscsqyhkmyrtvkaitgrqifqplhalrnaekvllpgyhpfewqpplknvssrtdvgiidglsglassvdeypvdtiakrfrydsalvsalmdmeedilegmrsqdlddylngpftvvvkescdgmgdvsekhgsgpavpekavrfsftvmritiehgsqnvkvfeepkpnselcckplclmladesdhetltailspliaereamksseltlemggiprtfkfifrgtgydeklvrevegleaSgsvyictlcdttrleasqnlvfhsitrshaenlqryevwrsnpyhesveelrdrvkgvsakpfietvpsidalhcdignaaefykifqleigevykhpnaskeerkrwqatldkhlrkrmnlKpIMRmNgnfarklmtqetvdavcelipseerhealrelmdlylkmkpvwrsscpakecpeslcqysfnsqrfaellstkfkyryegkitnyfhktlahvpeiierdgsigawasegnqsgnklfrrfrkmnarqskcyemedvlkhhwlytskylqkfmnahna
interface signature	NSKIMRN

Estimated binding specificities ?

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# IC=4.475 IC/col=0.172 n_of_columns=26

specificity:

A |   0  96   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  57  13
C |  96   0  96  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  13  13
G |   0   0   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  13  54
T |   0   0   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  13  16

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updated Fri Sep 13 01:16:46 2024