interface graph thumbnail
legend  pdf

structure nameTHE COMPLEX STRUCTURE OF HSROSR-S4 (VNG0258/ROSR-S4)
(DNA-binding protein)
referenceKutnowski et al. 'Nucleic 47 8860 2019
sourceHalobacterium salinarum NRC-1
experimentX-ray (resolution=2.13, R-factor=0.211)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyTranscriptional regulator PadRlike family;
multimeric complexes6qfd_AB 6qh0_AB 6qh0_CD 6qil_AB 6qil_CD 6qua_AB 6qua_CD
reference complex6qil_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureLNHRYPR

Estimated binding specificities ?

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# IC=3.673 IC/col=0.612 n_of_columns=6 specificity:   
A |  73   7  96  24   7   7
C |   9  75   0  24   7   7
G |   7   7   0  24  73   7
T |   7   7   0  24   9  75
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updated Fri Sep 13 01:38:37 2024