6y5d_Q : 3D-footprint complex

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	STRUCTURE OF HUMAN CGAS (K394E) BOUND TO THE NUCLEOSOME (HISTONE H3.2)
source	HOMO SAPIENS
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	6y5d_ABCDEFGH 6y5d_KMNOPQRST
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 6y5d_Q interface=1, Ryrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvglfedtnlaaihakrvtimpkdiqlarrirge

  
  --RT----         +-----------------------------8grq_A    
                 +-9 
  LCRT----       ! +-----------------------------8hr1_E    
                 !  
  --RA----       !                          +--7xsx_a    
                 !                  +-------4 
  ----RA--       !                  !       +--6g0l_D    
               -10                +-5 
  --RA----       !                ! !         +1zla_C    
                 !                ! +---------3 
  --RA--RA       !             +--6           +6a5l_g    
                 !             !  ! 
  --RG----       !             !  !            +8txv_G    
                 !             !  +------------2 
  --RG----       +-------------8               +8ox0_C    
                               ! 
  --RT----                     !                 +8u14_G    
                               ! +---------------1 
  --RG----                     +-7               +5x0y_G    
                                 ! 
  --RG----                       +---------------8jla_C

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updated Sun Aug 3 14:30:08 2025