7k6p_A : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	ACTIVE STATE DOT1 BOUND TO THE UNACETYLATED H4 NUCLEOSOME
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	7k6p_ABCDEFGH 7k6q_ABCDEFGHK 7xcr_ABCDEFGH 7xct_ABCDEFGHL
redundant complexes	7k6q_A 7xcr 7xct
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7k6p_A interface=3,4,5,47, kpHRYrpgtvalreirryqkstellirklpfqrlvreiaqdfmtdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger

  
  HTRG--------RT                                   +8g57_E    
                                         +---------1 
  --RT--RG------                         !         +6pww_K    
                                         ! 
  HTRA----LT--RC                     +---7         +5xm1_A    
                                     !   !  +------2 
  --RT--------RA                     !   !  !      +7ea8_A    
                                     !   +--6 
  ------------RA         +-----------8      !   +--7xsx_a    
                         !           !      +---5 
  ------------RC         !           !          +--6qld_f    
                         !           ! 
  --RGYA--LC----         !           !            +5mlu_A    
                       +-9           +------------4 
  --RG--RC------       ! !                        ! +6fq8_A    
                       ! !                        +-3 
  --RG----------     -10 !                          +6y5d_Q    
                       ! ! 
  ----------KT--   L   ! +-------------------------7cvo_A    
                       !  
  --RA----LT----       +--------------------------4z5t_A

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updated Sat Sep 14 02:54:19 2024