7k6p_A : 3D-footprint complex

Interface of input file ?

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.

Dendrogram of similar interfaces ?

matrix format

structure name	ACTIVE STATE DOT1 BOUND TO THE UNACETYLATED H4 NUCLEOSOME
experiment	NMR
structural superfamily	Histone-fold;
sequence family	Core histone H2A/H2B/H3/H4;
multimeric complexes	7k6p_ABCDEFGH 7k6q_ABCDEFGHK 7xcr_ABCDEFGH 7xct_ABCDEFGHL
redundant complexes	7k6q_A 7xcr 7xct
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 7k6p_A interface=3,4,5,47, kpHRYrpgtvalreirryqkstellirklpfqrlvreiaqdfmtdlRfqssavmalqeaseaylvalfedtnlcaihakrvtimpkdiqlarrirger

  
  RG--------                                      +8jh2_e    
                                   +--------------2 
  RG--RT----               +-------4              +8grq_A    
                           !       ! 
  RGLCRT----             +-6       +---------------8hr1_E    
                         ! ! 
  ------RA--           +-7 +-----------------------6g0l_D    
                       ! ! 
  ----RG----         +-8 +-------------------------5x0y_G    
                     ! ! 
  ----RG----       +-9 +-------------------------8ox0_C    
                   ! ! 
  ----RA--RA       ! +--------------------------6a5l_g    
                   !  
  ----RG----     -10                             +8txv_G    
                   !                           +-1 
  ----RA----       !       +-------------------3 +1zla_C    
                   !       !                   ! 
  ----RG----       +-------5                   +8jla_C    
                           ! 
  ----RT----               +--------------------8u14_G

home
updated Wed Dec 18 09:24:37 2024